Publications

Below is a list of my publications:

Journal Articles

  • Martyn Fyles, Jonathon Mellor, Robert S. Paton, Christopher E. Overton, Alexander M. Phillips, Alex Glaser and Thomas Ward, 2026. "Estimating COVID-19 incidence and prevalence using lateral flow tests in England and Scotland, 2023-2024." Nature Communications, 17(1). DOI link
  • Jonathon Mellor, Martyn Fyles, Robert S. Paton, Alexander Phillips, Christopher E. Overton and Thomas Ward, 2025. "Assessing the impact of SARS-CoV-2 on influenza-like illness surveillance trends in the community during the 2023/2024 winter in England." International Journal of Infectious Diseases, 150. DOI link
  • Efthyvoulos Drousiotis, Alessandro Varsi, Alexander M. Phillips, Simon Maskell and Paul G. Spirakis, 2025. "A Massively Parallel SMC Sampler for Decision Trees." Algorithms, 18(1). DOI link
  • Benjamin Mawdsley, Sam Dorkings, Simon Maskell, David Pickup, Samantha Chong, Thomas Farrell and Alexander Phillips, 2025. "Probabilistic modelling to account for uncertainty in portable energy dispersive X-ray diffraction measurements." Nuclear Instruments and Methods in Physics Research Section A: Accelerators, Spectrometers, Detectors and Associated Equipment, 1075. DOI link
  • Aseel Sharaireh, Marta Guevara-Ferrer, Anna M. Ludlaim, Jonathan D. Humphries, Alexander M. Phillips, Andrew W. Dowsey, Zehan Zhang, John R. Counsell, Richard D. Unwin, Sara E. Mole, Ahad A. Rahim and Tristan R. McKay, 2025. "CLN7 protein functions at the interface between endolysosomes and stress granules to promote cell survival." Cell Death & Disease, 16(1). DOI link
  • Christopher E. Overton, Martyn Fyles, Jonathon Mellor, Robert S. Paton, Alexander M. Phillips, Alex Glaser, Andre Charlett and Thomas Ward, 2025. "SARS-CoV-2 test sensitivity and duration of positivity in the UK during the 2023/2024 Winter: A prospective cohort study based on self-reported data." Journal of Infection, 90(6). DOI link
  • Jiahe Lu, Alisa Veler, Boris Simonetti, Timsse Raj, Po Han Chou, Stephen J. Cross, Alexander M. Phillips, Xiongtao Ruan, Lan Huynh, Andrew W. Dowsey, Dingwei Ye, Robert F. Murphy, Paul Verkade, Peter J. Cullen and Christoph Wülfing, 2023. "Five Inhibitory Receptors Display Distinct Vesicular Distributions in Murine T Cells." Cells, 12(21). DOI link
  • Alexander M. Phillips, Michael J. Wright, Isabelle Riou, Stephen Maddox, Simon Maskell and Jason F. Ralph, 2022. "Position fixing with cold atom gravity gradiometers." AVS Quantum Science, 4(2). DOI link preprint highlight
  • Selina Mcharg, Laura Booth, Rahat Perveen, Isabel Riba Garcia, Nicole Brace, Nadhim Bayatti, Panagiotis I. Sergouniotis, Alexander M. Phillips, Anthony J. Day, Graeme C. M. Black, Simon J. Clark, Andrew W. Dowsey, Richard D. Unwin and Paul N. Bishop, 2022. "Mast cell infiltration of the choroid and protease release are early events in age-related macular degeneration associated with genetic risk at both chromosomes 1q32 and 10q26." Proceedings of the National Academy of Sciences, 119(20). DOI link
  • Michael J. Wright, Luke Anastassiou, Chinmaya Mishra, James M. Davies, Alexander M. Phillips, Simon Maskell and Jason F. Ralph, 2022. "Cold atom inertial sensors for navigation applications." Frontiers in Physics, 10. DOI link
  • Fiona K. Jones, Alexander M. Phillips, Andrew R. Jones and Addolorata Pisconti, 2022. "The INSR/AKT/mTOR pathway regulates the pace of myogenesis in a syndecan-3-dependent manner." Matrix Biology, 113. DOI link
  • Jingshu Xu, Stefano Patassini, Nitin Rustogi, Isabel Riba-Garcia, Benjamin D. Hale, Alexander M. Phillips, Henry Waldvogel, Robert Haines, Phil Bradbury, Adam Stevens, Richard L. M. Faull, Andrew W. Dowsey, Garth J. S. Cooper and Richard D. Unwin, 2019. "Regional protein expression in human Alzheimer’s brain correlates with disease severity." Communications Biology, 2(1). DOI link
  • Sarah Kassab, Paul Begley, Stephanie J. Church, Sanziana M. Rotariu, Cleo Chevalier-Riffard, Andrew W. Dowsey, Alexander M. Phillips, Leo A. H. Zeef, Ben Grayson, Joanna C. Neill, Garth J. S. Cooper, Richard D. Unwin and Natalie J. Gardiner, 2019. "Cognitive dysfunction in diabetic rats is prevented by pyridoxamine treatment. A multidisciplinary investigation." Molecular Metabolism DOI link

Conference Papers

  • Elias J. Griffith, Alexander M. Phillips, Liam Mai, Simon Maskell and Jason F. Ralph, 2024. "Target tracking in a complex simulated world." In Electro-Optical and Infrared Systems: Technology and Applications XXI, 13200:131–142. DOI link
  • Efthyvoulos Drousiotis, Alexander M. Phillips, Paul G. Spirakis and Simon Maskell, 2023. "Bayesian Decision Trees Inspired from Evolutionary Algorithms." In Learning and Intelligent Optimization, :318–331. DOI
  • Alexander M. Phillips, Michael J. Wright, Marton Kiss-Toth, Iain Read, Isabelle Riou, Stephen Maddox, Simon Maskell and Jason F. Ralph, 2020. "Augmented inertial navigation using cold atom sensing." In Cold Atoms for Quantum Technologies, 11578:115780C. DOI link

Book Chapters

  • Alexander M. Phillips, Richard D. Unwin, Simon J. Hubbard and Andrew W. Dowsey, 2023. "Uncertainty-Aware Protein-Level Quantification and Differential Expression Analysis of Proteomics Data with seaMass." In Statistical Analysis of Proteomic Data: Methods and Tools, 141–162. Springer US. DOI link
  • Hanqing Liao, Alexander Phillips, Andris Jankevics and Andrew W. Dowsey, 2017. "Chapter 7 Algorithms for MS1-Based Quantitation." In Proteome Informatics, 133–154. The Royal Society of Chemistry. DOI link

Last updated: 2026-03-06